Publications

Primary Publications (Most recent first)

2008
Ochoa, W. F., W. M. Havens, R. S. Sinkovits, M. L. Nibert, S. A. Ghabrial, and T. S. Baker (2008).
      Partitivirus structure reveals a 120-subunit, helix-rich capsid with distinctive surface arches
      formed by quasisymmetric coat-protein dimers. Structure 16:776-786. (PDF)
Tang, J., N. Olson, P. J. Jardine, S. Grimes, D. L. Anderson, and T. S. Baker (2008). DNA Poised
      for Release in Bacteriophage Φ29. Structure 16:935-943. (PDF)

2007
Yan X., K. A. Dryden, J. Tang, and T. S. Baker (2007) Ab initio random model method facilitates
      3D reconstruction of icosahedral particles. J. Struct. Bio. 157:211-225. (PDF)
Yan X., R. S. Sinkovits, and T. S. Baker (2007) AUTO3DEM - an automated and high throughput
      program for image reconstruction of icosahedral particles. J. Struct. Bio. 157:73-82. (PDF)

2006
Ji, Y., D. C. Marinescu, W. Zhang, X. Zhang, X. Yan, and T. S. Baker (2006) A model-based
      parallel origin and orientation refinement algorithm for cryoTEM and its application
      to the study of virus structures. J. Struct. Bio. 154:1-19. (PDF)
Mukhopadhyay, S., W. Zhang, S. Gabler, P. R. Chipman, E. G. Strauss, J. H. Strauss, T. S.
      Baker, R. J. Kuhn and M. G. Rossmann (2006) Mapping the structure and function
      of the E1 and E2 glycoproteins in alphaviruses. Structure 14:63-73.(PDF)
Sherman, M. B., R. H. Guenther, F. Tama, T. L. Sit, C. L. Brooks, A. M. Mikhailov, E. V. Orlova,
      T. S. Baker, and S. A. Lommel (2006). Removal of divalent cations induces structural transitions
      in Red Clover Necrotic Mosaic Virus, revealing a potential mechanism for RNA release.
       J. Virol. 80:10395-10406. (PDF)

2005
Padron, E., V. Bowman, N. Kaludov, L. Govindasamy, H. Levy, P. Nick, R. McKenna, N.
     Muzyczka, J. A. Chiorini, T. S. Baker, and M. Agbandje-McKenna (2005) Structure of
     adeno-associated virus type 4. J. Virol. 79:5047-5058. (PDF)
Yan, X., P. R. Chipman, T. Castberg, G. Bratbak, and T. S. Baker (2005) The marine algal virus
      PpV01 has an icosahedral capsid with T=219 quasisymmetry. J. Virol. 79:9236-9243. (PDF)
Zhang, W., M. Heil, R. J. Kuhn, and T. S. Baker (2005) Heparin binding sites on Ross River virus
     revealed by electron cryo-microscopy. Virology 332:511-518. (PDF)
Zhang, X., Y. Ji, L. Zhang, S. C. Harrison, D. C. Marinescu, M. L. Nibert, and T. S. Baker (2005)
      Features of reovirus outer capsid protein μ1 revealed by electron cryomicroscopy
      and image reconstruction of the virion at 7.0Å resolution. Structure 13:1545-1557. (PDF)
Zhang, X., J. Tang, S. B. Walker, D. O'Hara, M. L. Nibert, R. Duncan, and T. S. Baker (2005)
      Structure of avian orthoreovirus virion by electron cryomicroscopy and image
      reconstruction. Virology 343:25-35. (PDF)

2004
Kong, Y., X. Zhang, T. S. Baker, and J. Ma (2004) A structural-informatics approach for tracing
    β-sheets: building pseudo-Cα-traces for β-strands in intermediate-resolution density maps.
     J. Mol. Biol. 339:117-130. (PDF)
Odegard, A. L., K. Chandran, X. Zhang, J. S. L. Parker, T. S. Baker, and M. L. Nibert (2004)
     Putative autocleavage of outer-capsid protein μ1, allowing release of myristoylated peptide
    μ1N during particle uncoating, is critical for cell entry by reovirus. J. Virol.
     78:8732-8745. (PDF)
Singh, V., D. C. Marinescu, and T. S. Baker (2004) Image segmentation for automatic particle
     identification in electron micrographs based on hidden Markov random field models and
     expectation maximization. J. Struct. Biol. 145:123-141. (PDF)
Walters, R. W., M. Agbandje-McKenna, V. D. Bowman, T. O. Moninger, N. H. Olson, M. Seiler, J.
     A. Chiorini, T. S. Baker, and J. Zabner (2004) Structure of adeno-associated virus serotype 5.
     J. Virol. 78:3361-3371. (PDF)
Zhang, Y., W. Zhang, S. Ogata, D. Clements, J. H. Strauss, T. S. Baker, R. J. Kuhn, and M. G.
     Rossmann (2004) Conformational changes of the flavivirus E glycoprotein. Structure 12:1607-
     1618. (PDF)

2003
Bernal, R. A., S. Hafenstein, N. H. Olson, V. D. Bowman, P. R. Chipman, T. S. Baker, B. A. Fane,
     and M. G. Rossmann (2003) Structural studies of bacteriophage α3 assembly. J. Mol. Biol.
    325:11-24. (PDF)
Willits, D. A., X. Zhao, N. Olson, T. S. Baker, A. Zlotnick, J. E. Johnson, T. Douglas, and M. J.
     Young (2003) Analysis of the cowpea chlorotic mottle bromovirus β-hexamer structure on virion
     assembly. Virology 306:280-288. (PDF)
Zhang, W., P. R. Chipman, J. Corver, P. R. Johnson, Y. Zhang, S. Mukhopadhyay, T. S. Baker, J.
     H. Strauss, M. G. Rossmann, and R. J. Kuhn (2003) Visualization of membrane protein domains
     by cryo-electron microscopy of dengue virus. Nat. Struct. Biol. 10:907-912. (PDF)
Zhang, X., S. B. Walker, P. R. Chipman, M. L. Nibert, and T. S. Baker (2003) Reovirus polymerase
     λ3 localized by electron cryomicroscopy of virions at 7.6-Å resolution. Nat. Struct. Biol. 10:1011-
     1018. (PDF)
Zhang, Y., J. Corver, P. R. Chipman, W. Zhang, S. V. Pletnev, D. Sedlak, T. S. Baker, J. H.
     Strauss, R. J. Kuhn, and M. G. Rossmann (2003) Structures of immature flavivirus particles.
     EMBO J. 22:2604-2613. (PDF)

2002
Bowman, V., E. Chase, A. Franz, P. R. Chipman, K. Perry, T. S. Baker, and T. J. Smith (2002)
     An antibody to the putative aphid recognition site on cucumber mosaic virus recognizes
     pentons but not hexons. J. Virol. 76:12250-12258. (PDF)
Guasch, A., J. Pous, B. Ibarra, F. X. Gomis-Ruth, J. M. Valpuesta, N. Sousa, J. L. Carrascosa,
     M. Coll, A. A. Simpson, Y. Tao, P. G. Leiman, M. O. Badasso, Y. He, P. J. Jardine, N. H.
     Olson, M. C. Morais, S. Grimes, D. L. Anderson, T. S. Baker, and M. G. Rossmann (2002)
     Note to the paper by Guasch et al. (2002) Detailed architecture of a DNA translocating machine:
     The high-resolution structure of the bacteriophage φ29 connector particle. J. Mol. Biol.
     321:379-380. (PDF)
He, Y., F. Lin, P. R. Chipman, C. M. Bator, T. S. Baker, M. Shoham, R. J. Kuhn, M. E. Medof,
     and M. G. Rossmann (2002) Structure of decay-accelerating factor bound to Echovirus 7:
     A virus-receptor complex. Proc. Natl. Acad. Sci. USA. 99:10325-10329. (PDF)
Kim, J., X. Zhang, V. E. Centonze, S. Noble, T. S. Baker, and M. L. Nibert (2002) The hydrophilic
     amino-terminal domain of reovirus core-shell protein λ1 is dispensable for core-shell assembly.
     J. Virol. 76:12211-12222. (PDF)
Kuhn, R. J., W. Zhang, M. G. Rossmann, S. V. Pletnev, J. Corver, E. Lenches, C. T. Jones, S.
     Mukhopadhyay, P. R. Chipman, E. G. Strauss, T. S. Baker, and J. H. Strauss (2002)
     Structure of dengue virus: Implications for flavivirus organization, maturation, and fusion.
     Cell 108:717-725. (PDF)
Liemann, S., K. Chandran, T. S. Baker, M. L. Nibert, and S. C. Harrison (2002) Structure of the
     reovirus membrane-penetration protein, μ1, in a complex with its protector protein, σ3.
     Cell 108:283-295. (PDF)
Luongo, C. L., X. Zhang, S. B. Walker, Y. Chen, T. J. Broering, D. L. Farsetta, V. D. Bowman,
     T. S. Baker, and M. L. Nibert (2002) Loss of activities for mRNA synthesis accompanies loss
     of λ2 spikes from reovirus cores: An effect of λ2 on λ1 shell structure. Virology 296:24-38. (PDF)
Nandhagopal, N., A. Simpson, J. R. Gurnon, X. Yan, T. S. Baker, M. V. Graves, J. L.
     Van Etten, M. G. Rossmann (2002) The structure and evolution of the major capsid protein
     of a large, lipid-containing, DNA virus. Proc. Natl. Acad. Sci. USA. 99:14758-14763. (PDF)
Zhang, W., B. R. Fisher, N. H. Olson, J. H. Strauss, R. J. Kuhn, and T. S. Baker (2002) Aura virus
     structure suggests that the T=4 organization is a fundamental property of the viral structural
     proteins. J. Virol. 76:7239-7246. (PDF)
Zhang, W., S. Mukhopadhyay, S. V. Pletnev, T. S. Baker, R. J. Kuhn, and M. G. Rossmann
     (2002) Placement of the structural proteins in Sindbis virus. J. Virol. 76:11645-11658. (PDF)

2001
Chandran, K., X. Zhang, N. H. Olson, S. B. Walker, J. D. Chappell, T. S. Dermody, T. S. Baker,
     and M. L. Nibert (2001) Complete in vitro assembly of the reovirus outer capsid produces
     highly infectious particles suitable for genetic studies of the cell attachment protein.
     J. Virol. 75:5335-5342. (PDF)
He, Y., P. R. Chipman, J. Howitt, V, C. M. Bator, M. A. Whitt, T. S. Baker, R. J. Kuhn, C. W.
     Anderson, P. Freimuth, and M. G. Rossmann (2001) Interaction of coxsackievirus B3 with full-
     length coxsackievirus and adenovirus receptor. Nat. Struct. Biol. 8:874-878. (PDF)
Morais, M. C., Y. Tao, N. H. Olson, S. Grimes, P. J. Jardine, D. L. Anderson, T. S. Baker, and
     M. G. Rossmann (2001) Cryo-EM image reconstruction of symmetry mismatches in
     bacteriophage φ29. J. Struct. Biol. 135:38-46. (PDF)
Olson, N. H., T. S. Baker, M. Gingery, and F. A. Eiserling (2001) The structure of isometric
     capsids of bacteriophage T4. Virology 279:385-391. (PDF)
Pletnev, S. V., W. Zhang, S. Mukhopadhyay, B. R. Fisher, R. Hernandez, D. T. Brown, T. S.
     Baker, M. G. Rossmann and R. J. Kuhn (2001) Locations of carbohydrate sites on alphavirus
     glycoproteins show that E1 forms an icosahedral scaffold. Cell 105:127-136. (PDF)
Xiao, C., C. M. Bator, V. D. Bowman, E. Rieder, Y. He, B. Hebert, J. Bella, T. S. Baker,
     E. Wimmer, R. J. Kuhn, and M. G. Rossmann (2001) Interaction of coxsackievirus A21 with
     its cellular receptor, ICAM-1. J. Virol. 75:2444-2451. (PDF)
Zhang, W., N. H. Olson, T. S. Baker, L. Faulkner, M. Agbandje-McKenna, M. I. Boulton,
      J. W. Davies, and R. McKenna (2001) Structure of the maize streak virus geminate particle.
     Virology 279:471-477. (PDF)

2000
He, Y., V. D. Bowman, S. Mueller, C. M. Bator, J. Bella, X. Peng, T. S. Baker, E. Wimmer,
     R. J. Kuhn, and M. G. Rossmann (2000) Interaction of the poliovirus receptor with poliovirus.
     Proc. Natl. Acad. Sci. USA. 97:79-84. (PDF)
Simpson, A. A., Y. Tao, P. G. Leiman, Y. He, M. O. Basso, Y. He, P. J. Jardine, N. H. Olson,
     M. C. Morais, S. Grimes, D. L. Anderson, T. S. Baker, and M. G. Rossmann (2000)
     Structure of the bacteriophage φ29 DNA packaging motor. Nature 408:745-750. (PDF)
Yan, X., N. H. Olson, J. L. van Etten, M. Bergoin, M. G. Rossmann, and T. S. Baker (2000)
     Structure and assembly of large, lipid-containing, dsDNA viruses. Nat. Struct. Biol.
     7:101-103. (PDF)

1999
Belnap, D. M., A. Kumar, J. T. Folk, T. J. Smith, and T. S. Baker (1999) Low-resolution density
     maps from atomic models: How stepping 'back' can be a step 'forward'. J. Struct. Biol.
     125:166-175. (PDF)
Chandran, K., S. B. Walker, Y. Chen, C. Contreras, S. Noble, L. A. Schiff, T. S. Baker, and
     M. L. Nibert (1999) In vitro recoating of reovirus cores with baculovirus-expressed μ1 and
      σ3 proteins. J. Virol. 73:3941-3950. (PDF)
Jane-Valbuena, J., M. L. Nibert, S. M. Spencer, S. B. Walker, T. S. Baker, Y. Chen, V. E.
     Centonze, and L. A. Schiff (1999) Reovirus virion-like particles obtained by recoating ISVPs
     with baculovirus-expressed σ3 protein: An approach for analyzing σ3 functions during virus
     entry. J. Virol. 73:2963-2973. (PDF)
Kolatkar, P. R., J. Bella, N. H. Olson, C. M. Bator, T. S. Baker, and M. G. Rossmann (1999)
     Structural studies of two rhinovirus serotypes complexed with fragments of their cellular
     receptor. EMBO J. 18:6249-6259. (PDF)
Krol, M., N. H. Olson, J. Tate, J. E. Johnson, T. S. Baker, and P. Ahlquist (1999) RNA-controlled
     polymorphism in the in vivo assembly of 180-subunit and 120-subunit virions from a single
     capsid subunit. Proc. Natl. Acad. Sci. USA. 96:13650-13655. (PDF)
McKenna, R., N. H. Olson, P. R. Chipman, T. S. Baker, T. F. Booth, J. Christensen, B. Aasted,
     J. M. Fox, M. E. Bloom, J. B. Wolfinbarger, and M. Agbandje-McKenna (1999) The three
     dimensional structure of Aleutian mink disease parvovirus: Implications for disease
     pathogenicity. J. Virol. 73:6882-6891. (PDF)
Sosinsky, G. E., T. S. Baker, G. Hand, and M. H. Ellisman (1999) The electron microscopy
     outreach program: A web based resource for research and education. J. Struct. Biol.
     125:246-252. (PDF)

1998
Che, Z., N. H. Olson, A. G. Mosser, D. Leippe, R. R. Rueckert, T. S. Baker, and T. J. Smith
     (1998) Antibody-mediated neutralization of human rhinovirus 14 explored by means of
     cryo-electron microscopy and X-ray crystallography of virus-Fab complexes. J. Virol.
     72:4610-4622. (PDF)
Chipman, P. R. , M. Agbandje-McKenna, J. Renaudin, T. S. Baker, and R. McKenna (1998)
     Structural analysis of the spiroplasma virus, SpV4: Implications for evolutionary variation to
     obtain host diversity among the Microviridae. Structure 6:135-145. (PDF)
Dryden, K. A., D. L. Farsetta, G. Wang, J. M. Keegan, B. N. Fields, T. S. Baker, and M. L.
     Nibert (1998) Internal structures containing transcriptase-related proteins in top component
     particles of mammalian orthoreovirus. Virology 245:33-46. (PDF)
Fox, J. M., G. Wang, J. A. Speir, N. H. Olson, J. E. Johnson, T. S. Baker, and M. Y. Young
     (1998) Comparison of the native CCMV virion with in vitro assembled CCMV virions by
     cryo-electron microscopy and image reconstruction. Virology 244:212-218. (PDF)
Simpson, A. A., P. R. Chipman, T. S. Baker, P. Tijssen, and M. G. Rossmann (1998) The structure
      of an insect parvovirus (Densovirus) at 3.7Å resolution. Structure 6:1355-1367. (PDF)
Tao, Y., N. H. Olson, W. Xu, D. L. Anderson, M. G. Rossmann, and T. S. Baker (1998) Assembly
     of a tailed bacterial virus and its genome release studied in three dimensions.
     Cell 95:431-437. (PDF)

1997
Belnap, D. M., N. H. Olson, and T. S. Baker (1997) A method for establishing the hand of biological
     macromolecules. J. Struct. Biol. 120:44-51. (PDF)
Boier Martin, I. M., D. C. Marinescu, R. E. Lynch, and T. S. Baker (1997) Identification of spherical
     virus particles in digitized images of entire electron micrographs. J. Struct. Biol.
     120:146-157. (PDF)
Kumar, A., V. Reddy, V. Yusibov, P. R. Chipman, Y. Hatta, I. Fita, K. Fukyama, M. Rossmann,
     S. Loesch-Fries, T. S. Baker and J. E. Johnson (1997) The structure of alfalfa mosaic virus
     assembled as a T=1 icosahedral particle at 4.0-Å resolution. J. Virol. 71:7911-7916. (PDF)
Luongo, C. L., K. A. Dryden, D. L. Farsetta, R. L. Margraf, T. F. Severson, N. H. Olson,
     B. N. Fields, T. S. Baker, and M. L. Nibert (1997) Localization of a C-terminal region
     of λ2 protein in reovirus cores. J. Virol. 71:8035-8040. (PDF)
Spencer, S. M., J.-Y. Sgro, K. A. Dryden, T. S. Baker, and M. L. Nibert (1997) IRIS explorer
     software for radial-depth cueing reovirus particles and other macromolecular structures
     determined by cryoelectron microscopy and image reconstruction.
     J. Struct. Biol. 120:11-21. (PDF)
Stoops, J. K., R. H. Cheng, M. A. Yazdi, C.-Y. Maeng, J. P. Schroeter, U. Klueppelberg,
     S. J. Kolodziej, T. S. Baker, and L. J. Reed (1997) On the unique structural organization of
     the Saccharomyces cerevisiae pyruvate dehydrogenase complex. J. Biol. Chem.
     272:5757-5764. (PDF)
Wikoff, W. R., C. J. Tsai, G. Wang, T. S. Baker and J. E. Johnson (1997) The structure of
     cucumber mosaic virus: cryo-electron microscopy, X-ray crystallography and sequence
     analysis. Virology 232:91-97. (PDF)

1996
Baker, T. S. and R. H. Cheng (1996) A model-based approach for determining orientations of
     biological macromolecules imaged by cryo-electron microscopy. J. Struct. Biol.
     116:120-130. (PDF)
Belnap, D. M., N. H. Olson, N. M. Cladel, W. W. Newcomb, J. C. Brown, J. W. Kreider, N. D.
     Christensen, and T. S. Baker (1996) Conserved features in papilloma and polyoma virus
     capsids. J. Mol. Biol. 259:249-263. (PDF)
Chipman, P. R., M. Agbandje-McKenna, S. Kajigaya, K. E. Brown, N. S. Young, T. S. Baker,
     and M. G. Rossmann (1996) Cryo-electron microscopy studies of empty capsids of human
     parvovirus B19, complexed with its cellular receptor. Proc. Natl. Acad. Sci. USA.
     93:7502-7506. (PDF)
Fuller, S. D., S. J. Butcher, R. H. Cheng, and T. S. Baker (1996) Three-dimensional reconstruction
     of icosahedral particles - The uncommon line. J. Struct. Biol. 116:48-55. (PDF)
Smith, T. J., E. S. Chase, T. J. Schmidt, N. H. Olson, and T. S. Baker (1996) Neutralizing
     antibody to human rhinovirus 14 penetrates the receptor-binding canyon.
     Nature 383:350-354. (PDF)

1995
Cheng, R. H., R. J. Kuhn, N. H. Olson, M. G. Rossmann, H.-K. Choi, T. J. Smith, and T. S.
     Baker (1995) Nucleocapsid and glycoprotein organization in an enveloped virus.
     Cell 80:621-630. (PDF)
Ilag, L. L., N. H. Olson, T. Dokland, C. L. Music, R. H. Cheng, Z. Bowen, R. McKenna, M. G.
     Rossmann, T. S. Baker, and N. L. Incardona (1995) DNA packaging intermediates of
     bacteriophage φX174. Structure 3:353-363. (PDF)
Smith, T. J., R. H. Cheng, N. H. Olson, P. Peterson, E. Chase, R. J. Kuhn, and T. S. Baker
     (1995) Putative receptor binding sites on enveloped viruses as visualized by cryo-electron
     microscopy. Proc. Natl. Acad. Sci. USA. 92:10648-10652. (PDF)
Speir, J. A., S. Munshi, G. Wang, T. S. Baker, and J. E. Johnson (1995) Structures of the native
     and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and
     cryo-electron microscopy. Structure 3:63-78. (PDF)
Zhao, X., J. Fox, N. H. Olson, T. S. Baker, and M. J. Young (1995) In vitro assembly of cowpea
     chlorotic mottle virus from coat protein expressed in E. coli and in vitro transcribed viral
     cDNA. Virology 207:486-494. (PDF)

1994
Cheng, R. H., J. R. Caston, G. J. Wang, F. Gu, T. J. Smith, T. S. Baker, R. F. Bozarth,
     B. L. Trus, N. Cheng, R. B. Wickner, and A. C. Steven (1994) Fungal virus capsids:
     cytoplasmic compartments for the replication of double-stranded RNA formed as icosahedral
     shells of asymmetric Gag dimers. J. Mol. Biol. 244:255-258. (PDF)
Cheng, R. H., V. Reddy, N. H. Olson, A. Fisher, T. S. Baker, and J. E. Johnson (1994) Functional
     implications of quasi-equivalence in a T=3 icosahedral animal virus established by
     cryo-electron microscopy and X-ray crystallography. Structure 2:271-282. (PDF)
Cramer, W. A., S. E. Martinez, D. Huang, G. -S. Tae, R. M. Everly, B. Heymann, R. H. Cheng,
     T. S. Baker, and J. L. Smith (1994) Structural aspects of the cytochrome b6f complex;
     Structure of the lumen-side domain of cytochrome f. J. Bioenerg. Biomem., special issue,
     in W. A. Cramer, ed., Structure-function of proteins involved in photosynthetic energy
     transduction, 26:31-47.
Hagensee, M., N. H. Olson, T. S. Baker, and D. Galloway (1994) Three-dimensional structure of
     vaccinia virus-produced HPV-1 capsids. J. Virol. 68:4503-4505. (PDF)
Huang, D., R. M. Everly, R. H. Cheng, J. B. Heymann, H. Schägger, V. Sled, T. Ohnishi,
     T. S. Baker, and W. A. Cramer (1994) Characterization of the chloroplast cytochrome b6f
     complex as a structural and functional dimer. Biochem. 33:4401-4409. (PDF)
Liu, H., T. J. Smith, W. M. Lee, A. G. Mosser, R. R. Rueckert, N. H. Olson, R. H. Cheng, and
     T. S. Baker (1994) Structure determination of an Fab fragment that neutralizes human
     rhinovirus 14 and analysis of the Fab-virus complex. J. Mol. Biol. 240:127-137. (PDF)
Porta, C., G. Wang, R. H. Cheng, Z. Chen, T. S. Baker, and J. E. Johnson (1994) Direct
     imaging of interactions between an icosahedral virus and conjugate Fab fragments by
     cryo-electron microscopy and X-ray crystallography. Virology 204:777-788. (PDF)
Wikoff, W. R., G. Wang, C. R. Parrish, R. H. Cheng, M. L. Strassheim, T. S. Baker, and
     M. G. Rossmann (1994) The structure of a neutralized virus: Canine parvovirus complexed
     with neutralizing antibody fragment. Structure 2:595-607. (PDF)
Yeager, M., J. A. Berriman, T. S. Baker, and A. R. Bellamy (1994) Three-dimensional structure of
     the rotavirus haemagglutinin VP4 by cryo-electron microscopy and difference map analysis.
     EMBO Journal 13:1011-1018.

1993
Belnap, D. M., W. D. Grochulski, N. H. Olson, and T. S. Baker (1993) Use of radial density plots
     to calibrate image magnification for frozen-hydrated specimens. Ultramicroscopy
     48:347-358. (PDF)
Dryden, K. A., G.-J. Wang, M. A. Yeager, M. Nibert, D. Furlong, K. Coombs, B. Fields,
     and T. S. Baker (1993) Early steps in reovirus infection are associated with dramatic changes
     in supramolecular structure and protein conformation: Analysis of virions and subviral particles
     by cryoelectron microscopy and three-dimensional image reconstruction. J. Cell Biol.
     122:1023-1041. (PDF)
Olson, N. H., P. R. Kolatkar, M. A. Oliveria, R. H. Cheng, J. M. Greve, A. McClelland, T. S.
     Baker, and M. G. Rossmann (1993) Structure of a human rhinovirus complexed with its
     receptor molecule. Proc. Natl. Acad. Sci. USA. 90:507-511. (PDF)
Smith, T. J., N. H. Olson, R. H. Cheng, H. Liu, E. S. Chase, W. M. Lee, D. M. Leippe, A. G.
     Mosser, R. R. Rueckert, and T. S. Baker (1993a) Structure of human rhinovirus complexed
     with Fab fragments from a neutralizing antibody. J. Virol. 67:1148-1158. (PDF)
Smith, T. J., N. H. Olson, R. H. Cheng, E. S. Chase, and T. S. Baker (1993b) Structure of a
     human rhinovirus-bivalently bound antibody complex: Implications for virus neutralization
     and antibody flexibility. Proc. Natl. Acad. Sci. USA. 90:7015-7018. (PDF)
Speir, J. A., S. Munshi, T. S. Baker, and J. E. Johnson (1993) Preliminary X-ray data analysis
     of crystalline cowpea chlorotic mottle virus. Virology 193:234-241. (PDF)

1992
Cheng, R. H., N. H. Olson, and T. S. Baker (1992) Cauliflower mosaic virus, a 420 subunit
     (T=7), multilayer structure. Virology 186:655-668. (PDF)
McKenna, R, D. Xi, P. Willingmann, L. L. Ilag, S. Krishnaswamy, M. G. Rossmann, N. H.
     Olson, T. S. Baker, and N. L. Incardona (1992) The atomic structure of the single-stranded
     DNA bacteriophage ΦX174 and its functional implications. Nature 355:137-143. (PDF)
Olson, N. H., T. S. Baker, P. Willingmann, and N. L. Incardona (1992) The three-dimensional
     structure of frozen-hydrated bacteriophage ΦX174. J. Struct. Biol. 108:168-175.
Stoops, J. K., T. S. Baker, J. P. Schroeter, S. J. Kolodziej, X.-D. Niu, and L. J. Reed (1992)
     Three-dimensional structures of the truncated core of the Saccharomyces cerevisiae
     pyruvate dehydrogenase complex determined from negative-stain and cryo-electron
     microscopy images. J. Biol. Chem. 267:24769-24775. (PDF)
Wang, G., C. Porta, Z. Chen, T. S. Baker, and J. E. Johnson (1992) Identification of a Fab
     interaction site (footprint) on an icosahedral virus by cryo-electron microscopy and X-ray
     crystallography. Nature 355:275-278. (PDF)

1991
Baker, T. S., W. W. Newcomb, N. H. Olson, L. M. Cowsert, C. Olson, and J. C. Brown (1991)
     Structures of bovine and human papilloma viruses: Analysis by cryoelectron microscopy
     and three-dimensional image reconstruction. Biophys. J. 60:1445-1456.
Booy, F. P., W. W. Newcomb, B. L. Trus, J. C. Brown, T. S. Baker, and A. C. Steven (1991)
     Liquid-crystalline, phage-like packing of encapsidated DNA in herpes simplex virus. Cell
     64:1007-1015. (PDF)
Guo, P., S. Erickson, W. Xu, N. H. Olson, T. S. Baker, and D. Anderson (1991) Regulation of
     the phage φ29 prohead shape and size by the portal vertex. Virology 183:366-373. (PDF)
Stoops, J. K., J. P. Schroeter, J.-P. Bretaudiere, N. H. Olson, T. S. Baker, and D. K. Strickland
     (1991) The structure of human α2-macroglobulin: Concordance between projected views
     obtained by negative stain and cryoelectron microscopy. J. Struct. Biol. 106:172-178.
Winkelmann, D. A., T. S. Baker, and I. Rayment (1991) Three-dimensional structure of myosin
     subfragment 1 from electron microscopy of sectioned crystals. J. Cell Biol.
     114:701-713. (PDF)

1990
Baker, T. S., W. W. Newcomb, F. P. Booy, J. C. Brown, and A. C. Steven (1990) Three-
     dimensional structures of maturable and abortive capsids of equine herpes virus type-1
     from cryo-electron microscopy. J. Virol. 64:563-573. (PDF)
Olson, N. H., T. S. Baker, J. E. Johnson, and D. A. Hendry (1990) The three-dimensional
     structure of frozen-hydrated Nudaurelia capensis β, a T=4 insect virus. J. Struct. Biol.
     105:111-122.
Sosinsky, G. E., T. S. Baker, D. L. D. Caspar, and D. A. Goodenough (1990) Correlation analysis
     of gap junction lattice images. Biophys. J. 58:1213-1226.
Yeager, M., K. A. Dryden, N. H. Olson, H. B. Greenburg, and T. S. Baker (1990) Three-dimensional
     structure of rotavirus by cryo-electron microscopy and image reconstruction. J. Cell Biol.
     110:2133-2144. (PDF)

1989
Baker, T. S., J. Drak, and M. Bina (1989) The capsid of small papova viruses contains 72
     pentameric capsomeres: direct evidence from cryo-electron microscopy of simian virus 40.
     Biophys. J. 55:243-253.
Olson, N. H., and T. S. Baker (1989) Magnification calibration and the determination of spherical
     virus diameters using cryo-microscopy. Ultramicroscopy 30:281-297. (PDF)

1988
Baker, T. S., J. Drak, and M. Bina (1988) Reconstruction of the three-dimensional structure of
     simian virus 40 and visualization of the chromatin core. Proc. Natl. Acad. Sci.
     USA 85:422-426. (PDF)

1985
Baker, T. S., G. E. Sosinsky, D. L. D. Caspar, C. Gall, and D. A. Goodenough (1985) Gap
     junction structures VII. Connexon morphology and packing imaged by negative stains.
     J. Mol. Biol. 184:81-98.

1984
Makowski, L., D. L. D. Caspar, W. C. Phillips, T. S. Baker, and D. A. Goodenough (1984) Gap
     junction structures VI. Variation and conservation in connexon conformation and packing.
     Biophys. J. 45:208-218.
Baker, T. S., and D. L. D. Caspar (1984) Computer image modeling of pentamer packing in
     polyoma virus "hexamer" tubes. Ultramicroscopy 13:137-152. (PDF)

1983
Baker, T. S., D. L. D. Caspar, C. Hollingshead, and D. A. Goodenough (1983) Gap junction
     structures IV. Asymmetric features revealed by low-irradiation electron microscopy.
     J. Cell. Biol. 96:204-216. (PDF)
Baker, T. S., D. L. D. Caspar, and W. T. Murakami (1983) Polyoma virus "hexamer" tubes
     consist of paired pentamers. Nature 303:446-448.
Rayment, I., T. S. Baker, and D. L. D. Caspar (1983) A description of the techniques and
     application of molecular replacement used to determine the structure of polyoma virus
     capsids at 22.5 Å resolution. Acta Cryst. B 39:505-516.

1982
Rayment, I., T. S. Baker, D. L. D. Caspar, and W. R. Murakami (1982) Polyoma virus capsid
     crystal structure at 22.5 Å resolution. Nature 295:110-115.

1979
Amos, L. A., and T. S. Baker (1979) The three-dimensional structure of tubulin protofilaments.
     Nature 279:607-612.
Amos, L. A., and T. S. Baker (1979) Three-dimensional image of tubulin in zinc-induced sheets,
     reconstructed from electron micrographs. Intl. J. Biol. Macromol. 1:146-156. (PDF)
Frank, J., W. Goldfarb, D. Eisenberg and T. S. Baker (1979) Addendum to
     'Reconstruction of glutamine synthetase using computer averaging'. Ultramicroscopy
     4:247. (PDF)

1978
Baker, T. S., and L. A. Amos (1978) Structure of the tubulin heterodimer in zinc-induced sheets.
     J. Mol. Biol. 123:89-106.
Frank, J., W. Goldfarb, D. Eisenberg, and T. S. Baker (1978) Reconstruction of glutamine
     synthetase using computer averaging. Ultramicroscopy 3:283-290. (PDF)

1977
Baker, T. S., D. Eisenberg, and F. A. Eiserling (1977) Ribulose bisphosphate carboxylase: a
     two-layered, square-shaped molecule of symmetry 422. Science 196:293-295. (PDF)
Baker, T. S., S. W. Suh, and D. Eisenberg (1977) Structure of ribulose-1,5-bisphosphate
     carboxylase-oxygenase: Form III crystals. Proc. Natl. Acad. Sci. USA 74:1037-1041. (PDF)

1975
Baker, T. S., D. Eisenberg, F. A. Eiserling, and L. Weissman (1975) The structure of Form I
     crystals of D-ribulose-1,5-diphosphate carboxylase. J. Mol. Biol. 91:391-399.

Reviews/Book Chapters/Proceedings (Most recent first)

2005
Baker, T. S., X. Zhang, J. Tang, Y. Ji, L. Zhang, S. C. Harrison, D. C. Marinescu, and
     M. L. Nibert (2005) Dissecting the structure and function of the orthoreovirus μ1 ('Penetrin') protein
     at 7.0-Å and higher resolution.  Proc. Microsc. Microanal. 2005 (Hawaii), 11:1070-1071. (PDF)
Yan, X., V. D. Bowman, N. H. Olson, J. L. Van Etten, M.G. Rossmann, and T. S. Baker (2005) The
     structure of a T=169d algal virus, PBCV-1, at 15 Å Resolution.  Proc. Microsc.
     Microanal. 2005 (Hawaii), 11:1056-1057. (PDF)
Yan, X., P. R. Chipman, T. Batistti, M. Bergoin, M.G. Rossmann, and T. S. Baker (2005) The
      structure of the T=147 iridovirus, CIV, at 13 Å resolution.  Proc. Microsc. Microanal. 2005 (Hawaii),
      11:134-135. (PDF)

2003
Henderson, R. and T. S. Baker (2003) Electron cryomicroscopy of biological macromolecules.
      In D. Abraham (Ed.), Burger's Medicinal Chemistry and Drug Discovery, John Wiley & Sons,
     1:611-632.
Nibert, M. L. and T. S. Baker (2003) CPV, a stable and symmetrical machine for mRNA synthesis.
     Structure 11:605-607. (PDF)

2002
Bowman, V. D., P. R. Chipman, T. J. Smith, E. S. Chase, A. W. E. Franz, K. L. Perry, and
     T. S. Baker (2002) Cucumber mosaic virus-Fab complex examined by electron cryo-microscopy
     and three-dimensional image reconstruction. Proc. Microsc. Microanal. 2002 (Quebec), 852-853.
Xiao, C., C. M. Bator, P. R. Chipman, T. S. Baker, R. J. Kuhn, E. Wimmer, A. Craig, and
     M. G. Rossmann (2002) Pseudo-atomic structure of coxsackievirus A21 complexed with its
     cellular receptor, ICAM-1. Proc. Microsc. Microanal. 2002 (Quebec), 822-823.
Zhang, X., S. B. Walker M. L. Nibert, and T. S. Baker (2002) Structure of the human reovirus virion
     at 9.6Å resolution. Proc. Microsc. Microanal. 2002 (Quebec), 846-847.
Zhang, W., S. Mukhopadhyay, S. V. Pletnev, R. J. Kuhn, M. G. Rossmann, and T. S. Baker
     (2002) Sindbis virus reconstruction at 11Å resolution reveals details of glycoprotein and
     nucleocapsid organization. Proc. Microsc. Microanal. 2002 (Quebec), 208-209.

2001
Baker, T. S. and R. Henderson (2001) Electron cryomicroscopy. Chap.19.6 In M. G.
     Rossmann and E. Arnold, (Eds.), International Tables for Crystallography Vol.F.
     Crystallography of Biological Macromolecules. Dordrecht:Kluwer Academic Publishers,
     The Netherlands, 451-463, 473-479. (PDF)
Henderson, R. and T. S. Baker (2001) Electron cryomicroscopy. In D. Turk and L. Johnson
     (Eds.), Methods in Macromolecular Crystallography, IOS Press, Ohmsha, 172-192.
Rieder, E., A. E. Gorbalenya, C. Xiao, Y. He, T. S. Baker, R. J. Kuhn, M. G. Rossmann and E.
     Wimmer (2001) Will the polio niche remain vacant? In F. Brown (Ed.), Progress in Polio
     Eradication: Vaccine Strategies for the End Game, Dev. Biol. Basel, Karger 105:1-12.
Yan, X., V. Bowman, G. Murti, R. Goorha, A. Hyatt and T. S. Baker (2001) 3D image
     reconstruction of frog virus 3 at 2.6nm. Proc. Microsc. Microanal. 2001 (Long Beach), 746-747.
Yan, X., P. Chipman, T. Castberg, G. Bratbak and T. S. Baker (2001) The Structure of PpV01, a
     marine algal virus with a T=219 capsid. Proc. Microsc. Microanal. 2001 (Long Beach), 748-749.

2000
Baker, T. S., N. H. Olson, and S. D. Fuller (2000) Erratum:Adding the third dimension to virus life
     cycles: Three-Dimensional reconstruction of icosahedral viruses from cryo-electron
     micrographs. Microbiol. Molec. Biol. Reviews 64:237. (PDF)
Baker, T. S., N. H. Olson, M. Gingery, and F. A. Eiserling (2000) Three-dimensional structure of
     isometric capsids of bacteriophage T4 Proc. Microsc. Microanal. 2000 (Philadelphia), 254-255.
Rossmann, M. G., J. Bella, P. R. Kolatkar, Y. He, E. Wimmer, R. J. Kuhn and T. S. Baker (2000)
     Cell recognition and entry by rhino- and enteroviruses. Virology 269:239-247. (PDF)

1999
Baker, T. S., N. H. Olson, and S. D. Fuller (1999) Adding the third dimension to virus life cycles:
     Three-Dimensional reconstruction of icosahedral viruses from cryo-electron micrographs.
     Microbiol. Molec. Biol. Reviews 63:862-922. (PDF)
Lynch, R. E., D. C. Marinescu, H. Lin, and T. S. Baker (1999) Parallel algorithms for 3D
     reconstruction of asymmetric objects from electron micrographs. 13th International Parallel
     Processing Symposium/ 10th Symposium on Parallel and Distributed Processing (San Juan,
     Puerto Rico), 632-637.
Smith, T. J. and T. S. Baker (1999) Picornaviruses: epitopes, canyons, and pockets. In
     Maramorosch, K., Murphy, F. A. and Shatkin, A. J. (eds), Advances in Virus Research,
     Academic Press, 52:1-23.
Yan, X., N. H. Olson, M. Bergoin, M. G. Rossmann, and T. S. Baker (1999) CIV, an iridovirus
     with a pseudo T=147 capsid structure. Proc. Microsc. Microanal. 1999 (Portland), 1134-1135.
Zhang, W., N. H. Olson, P. R. Chipman, R. McKenna, and T. S. Baker (1999) The structure of
     maize streak virus: Are two heads better than one? Proc. Microsc. Microanal. 1999 (Portland),
     1132-1133.

1998
Stoops, J. K., Z. H. Zhou, J. P. Schroeter, S. J. Kolodziej, R. H. Cheng, T. S. Baker, D. L. B.
     McCarthy, M. A. Yazdi, C.-Y. Maeng, and L. J. Reed (1998) On the unique structural
     organization of the Saccharomyces cerevisiae pyruvate dehydrogenase complex. Proc. Microsc.
     Microanal. 1998 (Atlanta) 954-955.
Tao, Y., N. H. Olson, D. L. Anderson, T. S. Baker, and M. G. Rossmann (1998) Cryo-EM
     reconstructions of bacteriophage Φ29 isometric particles and empty mature heads. Proc. 14th
     Int'l. Cong. Elec. Microsc. (Cancun) 1:721-722.
Yan, X., N. H. Olson, J. L. Van Etten, and T. S. Baker (1998) Cryo-electron microscopy and image
     reconstruction of PBCV-1, an algal virus with T=169, icosahedral lattice symmetry. Proc.
     Microsc. Microanal. 1998 (Atlanta) 948-949.
Yan, X., N. H. Olson, J. L. Van Etten, and T. S. Baker (1998) Cryo-electron microscopy and
     image reconstruction of PBCV-1, an algal virus with T=169 lattice symmetry. Proc. 14th Int'l.
     Cong. Elec. Microsc. (Cancun) 1:775-776.
Zhang, W., N. H. Olson, B. R. McKinney, R. J. Kuhn, and T. S. Baker (1998) Cryo-electron
     microscopy of aura viruses. Proc. Microsc. Microanal. 1998 (Atlanta) 946-947.

1997
Baker, T. S. and J. E. Johnson (1997) Principles of virus structure determination, In W. Chiu,
     R. M. Burnett, and R. Garcea (eds.), Structural Biology of Viruses, Oxford Univ. Press, New
     York, pp. 38-79.
Chipman, P. R. , R. McKenna, J. Renaudin, and T. S. Baker (1997) Cryoelectron microscopy of
     spiroplasma virus SpV4. Proc. Microsc. Microanal. 1997 (Cleveland) 87-88.
Olson, N. H., P. R. Chipman, M. E. Bloom, R. McKenna, M. Agbanje-McKenna, T. F. Booth,
     and T. S. Baker (1997) Automated CCD data collection and 3D reconstruction of Aleutian
     Mink disease parvovirus. Proc. Microsc. Microanal. 1997 (Cleveland) 1117-1118.
Pan, M., N. H. Olson, and T. S. Baker (1997) Automated acquisition of cryo-electron microscope
     images with slow-scan CCD camera and microscope control. Proc. Microsc. Microanal.
     1997 (Cleveland) 1113-1114.

1996
Baker, T. S. and J. E. Johnson (1996) Low resolution meets high: Towards a resolution continuum
     from cells to atoms. Curr. Opin. Struct. Biol. 6:585-594. (PDF)
Smith, T. J., N. H. Olson, Z. Che, E. Chase, R. H. Cheng, T. S. Baker, A. G. Mosser, D. Leippe,
     and R. R. Rueckert (1996) Structural studies on virus-antibody interactions. In Vaccines96:
     Molecular approaches to the control of infectious diseases, F. Brown, E. Norrby, D. Burton,
     and J. Mekalanos, Eds. (Cold Spring Harb. Lab. Press), pp.161-167.

1995
Olson, N. H., U. Lücken, S. B. Walker, M. T. Otten, and T. S. Baker (1995) Cryoelectron
     microscopy and image reconstruction of spherical viruses with spot scan and FEG
     technologies. Proc. Microsc. Microanal. 1995 (Kansas City) 1086-1087.
Cheng, R. H., N. H. Olson, T. S. Baker, R. J. Kuhn, and T. J. Smith (1995) Cryo-electron
     microscopy, antibody labeling, and image analysis reveals macromolecular interactions in
     enveloped alphaviruses. Zool. Studies 4(Suppl. 1):130-131.
Smith, T. J., A. G. Mosser, and T. S. Baker (1995) Structural studies on the mechanisms of
     antibody-mediated neutralization of human rhinovirus. Sem. Virol. 6:233-242.

1994
Johnson, J. E., S. Munshi, L. Liljas, D. Agrawal, N. H. Olson, V. Reddy, A. Fisher, B. McKinney,
     T. Schmidt, and T. S. Baker (1994) Comparative studies of T=3 and T=4 icosahedral RNA
     insect viruses. Arch. Virol. 9:497-512.
Rossmann, M. G., N. H. Olson, P. R. Kolatkar, M. A. Oliveria, R. H. Cheng, J. M. Greve,
     A. McClelland, and T. S. Baker (1994) Crystallographic and cryoEM analysis of virion-receptor
     interactions. Arch. Virol. 9:531-541.
Baker, T. S., R. H. Cheng, V. S. Reddy, N. H. Olson, A. J. Fisher, and J. E. Johnson (1994)
     Cryo-electron microscopy and X-ray crystallographic studies of Flock House virus, a T=3
     icosahedral animal virus. Proc. 13th Intern. Cong. Elec. Microsc. (Paris). 3A:525-526.

1992
Baker, T. S. (1992) Cryo-electron microscopy and three-dimensional image reconstruction of
     icosahedral viruses. 10th Europ. Cong. Elec. Microsc. (Granada) 3:275-279.
Baker, T. S., R. H. Cheng, J. E. Johnson, N. H. Olson, G. J. Wang, and T. S. Schmidt (1992)
     Organized packing of RNA inside viruses as revealed by cryo-electron microscopy and X-ray
     diffraction analysis. Proc. Elec. Microsc. Soc. Amer. (Boston) 50:454-455.
Belnap, D. M., N. H. Olson, W. D. Grochulski, and T. S. Baker (1992) The use of radial density
     plots to calibrate images of frozen-hydrated specimens. Proc. Elec. Microsc. Soc. Amer.
     (Boston) 50:998-999.
Olson, N. H., T. J. Smith, P. R. Kolatkar, M. A. Oliveria, R. R. Rueckert, J. M. Greve, M. G.
     Rossmann, and T. S. Baker (1992) Cryoelectron microscopy of complexes of human
     rhinovirus with a monoclonal Fab and the viral cellular receptor. Proc. Elec. Microsc. Soc.
     Amer. (Boston) 50:524-525.
Wang, G., C. Porta, Z. Chen, R. H. Cheng, T. S. Baker, and J. E. Johnson (1992) The analysis of
     a spherical virus-Fab interaction by cryo-electron microscopy and X-ray crystallography.
     Fifth Asia-Pacific Elec. Microsc. Conf. (Beijing) 2:158-159.

1990
Olson, N. H., W. Xu, W. D. Grochulski, D. L. Anderson, and T. S. Baker (1990) Electron
     microscopy of negatively-stained and frozen-hydrated bacteriophage Φ29. Proc. XIIth Intl.
     Cong. Elec. Microsc. 1:270-271.
Wang, G., K. A. Dryden, K. M. Coombs, D. B. Furlong, and T. S. Baker (1990) Cryo-electron
     microscopy of reovirus intermediate subviral particles. Proc. XIIth Intl. Cong. Elec. Microsc.
     1:276-277.

1989
Baker, T. S., N. H. Olson, W. W. Newcomb, J. C. Brown, and C. Olson (1989) Electron microscopy
     of stained and unstained bovine papilloma virus: comparison with polyoma virus. Proc. Elec.
     Microsc. Soc. Amer. (San Antonio) 47:820-821.
Baker, T. S., W. W. Newcomb, F. P. Booy, J. C. Brown, and A. C. Steven (1989) Three-
     dimensional reconstructions of 'light' and 'intermediate' capsids of equine herpes virus".
     Proc. Elec. Microsc. Soc. Amer. (San Antonio) 47:822-823.
Cheng, R. H., N. H. Olson, and T. S. Baker (1989) Cryo-electron microscopy of cauliflower mosaic
     virus. Proc. Elec. Microsc. Soc. Amer. (San Antonio) 47:824-825.

1988
Olson, N. H., and T. S. Baker (1988) Diameter determination of frozen-hydrated virions using
     polyoma virus as a calibration standard. Proc. Elec. Microsc. Soc. Amer. (Milwaukee)
     46:166-167.

1987
Baker, T. S., and I. Rayment (1987) Papovaviridae. In M. V. Nermut and A. C.
     Steven (eds.), Manual of Animal Virus Research. Elsevier Science Publisher B. V.,
     Amsterdam, pp. 335-348.
Olson, N. H., T. S. Baker, W. B. Mu, J. E. Johnson, and D. A. Hendry (1987)
     The three-dimensional structure of frozen-hydrated Nudaurelia capensis β virus.
     Proc. Elec. Micros. Soc. Amer. (Baltimore) 45:650-651.

1986
Baker, T. S., and D. A. Winkelmann (1986) Methodology for determining the three-dimensional
     crystal structure of myosin S1 from electron microscopy of orthogonal thin-sections. Proc.
     Elec. Microsc. Soc. Amer. (Albuquerque) 44:26-29.

1985
Baker, T. S., J. Drak, and M. Bina (1985) Cryo-electron microscopy and image analysis of SV40.
     Proc. Elec. Microsc. Soc. Amer. (Louisville) 43:316-317.

1983
Baker, T. S., and D. L. D. Caspar (1983) Pentamer packing in polyoma virus "hexamer" tubes
     analyzed by image modeling. Proc. Elec. Microsc. Soc. Amer. (Phoenix) 41:458-459.
Baker, T. S., and D. L. D. Caspar (1983) Modeling connexon skewing in gap junction lattices.
     Proc. Elec. Microsc. Soc. Amer. (Phoenix) 41:744-745.

1981
Baker, T. S. (1981) Image processing of biological specimens: a bibliography, p. 189-290.
     In J. D. Griffith (ed.), Electron Microscopy in Biology, Vol. 1, Ch. 6. John Wiley and Sons,
     New York.

1978
Baker, T. S. (1978) Preirradiation and minimum beam microscopy of periodic
     biological specimens. Proc. Ninth Intl. Cong. Elec. Microsc. (Toronto) 2:2-3.
Baker, T. S. (1978) The packing of cowpea chlorotic mottle virus in crystalline monolayers.
     Proc. Ninth Intl. Cong. Elec. Microsc. (Toronto) 2:24-25.
Baker, T. S., and L. A. Amos (1978) The structure of the tubulin heterodimer in zinc-induced
     sheets. Proc. Ninth Intl. Cong. Elec. Microsc. (Toronto) 2:272-273.
Eisenberg, D., T. S. Baker, S. W. Suh, and W. W. Smith (1978) Structural studies of
     ribulose-1,5-bisphosphate carboxylase/oxygenase. In H. W. Siegelman and G. Hind (eds.),
     Photosynthetic Carbon Assimilation, p. 271-281. Plenum Publishing Corp., New York.